Package | Description |
---|---|
analyses | |
analyses.result | |
thread |
Modifier and Type | Field and Description |
---|---|
private FVAResult |
CompFVAAnalysis.res1
First FVA result.
|
private FVAResult |
CompFVAAnalysis.res2
Second FVA result.
|
Modifier and Type | Method and Description |
---|---|
FVAResult |
FVAAnalysis.runAnalysis() |
Constructor and Description |
---|
CompFVAAnalysis(Bind b,
FVAResult res1,
FVAResult res2)
It is constructed with two FVA results and then compares them.
|
Constructor and Description |
---|
PhenotypicPhaseComparator(java.util.Map<java.lang.Integer,FVAResult> fvaResults) |
Modifier and Type | Class and Description |
---|---|
class |
DRResult
Class representing the result of dead reactions analysis.
|
Modifier and Type | Field and Description |
---|---|
private FVAResult |
ThreadFVA.result
The FVA result.
|
Modifier and Type | Method and Description |
---|---|
ThreadFVA |
ThreadFactoryCPLEX.makeFVAThread(boolean interactionInSolver,
java.util.Queue<parsebionet.biodata.BioEntity> ents,
java.util.Queue<parsebionet.biodata.BioEntity> entsCopy,
FVAResult result) |
ThreadFVA |
ThreadFactoryGLPK.makeFVAThread(boolean interactionInSolver,
java.util.Queue<parsebionet.biodata.BioEntity> ents,
java.util.Queue<parsebionet.biodata.BioEntity> entsCopy,
FVAResult result) |
abstract ThreadFVA |
ThreadFactory.makeFVAThread(boolean interactionInSolver,
java.util.Queue<parsebionet.biodata.BioEntity> entQueue,
java.util.Queue<parsebionet.biodata.BioEntity> entQueueCopy,
FVAResult result)
Makes a thread for an FVA analysis.
|
Constructor and Description |
---|
ThreadFVA(Bind b,
java.util.Queue<parsebionet.biodata.BioEntity> ents,
java.util.Queue<parsebionet.biodata.BioEntity> entsCopy,
FVAResult result) |