Input:String

Name:TIGRXML

<?xml version="1.0" encoding="ISO-8859-1"?>
<TIGR>
      <TU>
                    <FEAT_NAME>1402.t00019</FEAT_NAME>
                    <DATE>3-Mar-2005</DATE>
                    <GENE_INFO>
                        <LOCUS>AC154034_19.1</LOCUS>
                        <COM_NAME CURATED="0" IS_PRIMARY="1">Peptidoglycan-binding LysM</COM_NAME>
                        <PUB_COMMENT> </PUB_COMMENT>
                        <IS_PSEUDOGENE>0</IS_PSEUDOGENE>
                        <FUNCT_ANNOT_EVIDENCE TYPE="CURATED"/>
                        <DATE>3-Mar-2005</DATE>
                    </GENE_INFO>
                    <COORDSET>
                        <END5>76625</END5>
                        <END3>77122</END3>
                    </COORDSET>
                    <MODEL COMMENT="IMGA|AC154034_19.1 AC154034.1 76625-77122 F EGN_Mt050217 20050303">
                        <FEAT_NAME>1402.m00019</FEAT_NAME>
                        <CDNA_SUPPORT>
                            <ACCESSION>spans 100 percent of the model length</ACCESSION>
                            <ACCESSION ANNOT_INCORP="1" DBXREF="MENS|MtC63349_GC" IS_FLI="1" UNIQUE_TO_ISOFORM="1">cDNA support spans 100 percent of the model</ACCESSION>
                            <ACCESSION ANNOT_INCORP="1" DBXREF="MtEST|BF645904" IS_FLI="1" UNIQUE_TO_ISOFORM="1">cDNA support spans 100 percent of the model</ACCESSION>
                        </CDNA_SUPPORT>
                        <DATE>3-Mar-2005</DATE>
                        <COORDSET>
                            <END5>76732</END5>
                            <END3>77022</END3>
                        </COORDSET>
                        <MODEL_ATTRIBUTE>
                            <ATTRIBUTE_TYPE METHOD="MW,molwt_update.dbi">
                                <ATT_SCORE DESC="Molecular Weight">11021.72</ATT_SCORE>
                            </ATTRIBUTE_TYPE>
                            <ATTRIBUTE_TYPE METHOD="PI,molwt_update.dbi">
                                <ATT_SCORE DESC="Isoelectric point">5.6262</ATT_SCORE>
                            </ATTRIBUTE_TYPE>
                            <ATTRIBUTE_TYPE METHOD="SP-HMM,signalP-2.0">
                                <ATT_SCORE DESC="HMM-position">25</ATT_SCORE>
                                <ATT_SCORE DESC="HMM-prediction">Signal peptide</ATT_SCORE>
                                <ATT_SCORE DESC="HMM-SPprob">0.984</ATT_SCORE>
                                <ATT_SCORE DESC="HMM-SAprob">0.016</ATT_SCORE>
                                <ATT_SCORE DESC="HMM-cleavprob">0.927</ATT_SCORE>
                            </ATTRIBUTE_TYPE>
                            <ATTRIBUTE_TYPE METHOD="SP-NN,signalP-2.0">
                                <ATT_SCORE DESC="NN-position">25</ATT_SCORE>
                                <ATT_SCORE DESC="NN-cleavsite">CES-RR</ATT_SCORE>
                                <ATT_SCORE DESC="NN-maxY">0.761</ATT_SCORE>
                                <ATT_SCORE DESC="NN-meanS">0.849</ATT_SCORE>
                            </ATTRIBUTE_TYPE>
                            <ATTRIBUTE_TYPE METHOD="targetP,targetP_update.dbi">
                                <ATT_SCORE DESC="Location">secreted</ATT_SCORE>
                                <ATT_SCORE DESC="c:m:s:o scores">0.017:0.106:0.968:0.006</ATT_SCORE>
                                <ATT_SCORE DESC="RC-value">1</ATT_SCORE>
                                <ATT_SCORE DESC="network:peplen">plant:96</ATT_SCORE>
                                <ATT_SCORE DESC="c:m:s:o cutoffs">0:0:0:0</ATT_SCORE>
                            </ATTRIBUTE_TYPE>
                            <ATTRIBUTE_TYPE METHOD="EGN_Mt050217">
                                <ATT_SCORE DESC="IMGA gene call evidence class">F</ATT_SCORE>
                            </ATTRIBUTE_TYPE>
                        </MODEL_ATTRIBUTE>
                        <EXON>
                            <FEAT_NAME>1402.e00070</FEAT_NAME>
                            <DATE>Mar  4 2005  3:22PM</DATE>
                            <COORDSET>
                                <END5>76625</END5>
                                <END3>77122</END3>
                            </COORDSET>
                            <CDS>
                                <FEAT_NAME>1402.c00070</FEAT_NAME>
                                <DATE>Mar  4 2005  3:22PM</DATE>
                                <COORDSET>
                                    <END5>76732</END5>
                                    <END3>77022</END3>
                                </COORDSET>
                            </CDS>
                            <UTRS>
                                <LEFT_UTR>
                                    <COORDSET>
                                        <END5>76625</END5>
                                        <END3>76731</END3>
                                    </COORDSET>
                                </LEFT_UTR>
                                <RIGHT_UTR>
                                    <COORDSET>
                                        <END5>77023</END5>
                                        <END3>77122</END3>
                                    </COORDSET>
                                </RIGHT_UTR>
                            </UTRS>
                        </EXON>
                        <CDS_SEQUENCE>ATGGCTATGAGAATTTCTAGATACTGTGTTTTATTTTCAGCAGTAATAATTCTATTATTGAATTGCTGTGAATCAAGAAGAAGCGAATTGACGGTTGAGATGAAGCAGAGGATTGCCAATAACAACAAAGCGTGTGATGAGATATATGTGGTTCGTGAAGGAGAGACTCTTCATACAATAAGTGAAAAATGTGGTGATCCATTTATTGTAGAAGAGAATCCACATATTCATGACCCAGATGATGTTTTTCCAGGTCTTGTTATCAAGATTAATCCTTTCACCAATCGATAG</CDS_SEQUENCE>
                        <PROTEIN_SEQUENCE>MAMRISRYCVLFSAVIILLLNCCESRRSELTVEMKQRIANNNKACDEIYVVREGETLHTISEKCGDPFIVEENPHIHDPDDVFPGLVIKINPFTNR</PROTEIN_SEQUENCE>
                    </MODEL>
                    <TRANSCRIPT_SEQUENCE>TCGTGACTATATTTGAAAGCTAAACCTTCAAGAAGCTGACAACATCAAACAAGCTAACCTTAGTCATATATATACAATATATGGCTTGTGCATTTTCTTCAATAACAATGGCTATGAGAATTTCTAGATACTGTGTTTTATTTTCAGCAGTAATAATTCTATTATTGAATTGCTGTGAATCAAGAAGAAGCGAATTGACGGTTGAGATGAAGCAGAGGATTGCCAATAACAACAAAGCGTGTGATGAGATATATGTGGTTCGTGAAGGAGAGACTCTTCATACAATAAGTGAAAAATGTGGTGATCCATTTATTGTAGAAGAGAATCCACATATTCATGACCCAGATGATGTTTTTCCAGGTCTTGTTATCAAGATTAATCCTTTCACCAATCGATAGAAGTCTTGTCTTTTGGGGTCTTGTTGAAGGTTAAAGTACAATGTATGAAGATACTCTTTTCACAGAAAGAATAGCCTCTTAATTATACTTGTGTTCCTTC</TRANSCRIPT_SEQUENCE>
                </TU>
      </TIGR>