Collection 0.1.3.1_1


 

  • 1

    Input:FASTA

  • Name:alignment

    Multalin version 5.4.1
    Copyright I.N.R.A. France 1989, 1991, 1994, 1996
    Published research using this software should cite
    Multiple sequence alignment with hierarchical clustering
    F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
    Symbol comparison table: blosum62
    Gap weight: 10
    Gap length weight: 2
    Consensus levels: high=90% low=50%
    Consensus symbols:
     ! is anyone of IV
     $ is anyone of LM
     % is anyone of FY
     # is anyone of NDQEBZ
    
     MSF:    723    Check:   0         ..
     Name: AC123570_11.1  Len:   723  Check: 5170  Weight:  1.18
     Name: AC147960_9.1   Len:   723  Check: 5170  Weight:  1.18
     Name: AC123570_22.1  Len:   723  Check:  502  Weight:  1.26
     Name: AC123570_14.1  Len:   723  Check: 1077  Weight:  1.15
     Name: AC147960_6.1   Len:   723  Check: 1077  Weight:  1.15
     Name: AC123570_20.1  Len:   723  Check: 5377  Weight:  1.09
     Name: AC126779_2.1   Len:   723  Check: 5060  Weight:  0.89
     Name: AC148994_16.1  Len:   723  Check:  429  Weight:  0.47
     Name: AC148994_17.1  Len:   723  Check: 6781  Weight:  0.47
     Name: AC126779_3.1   Len:   723  Check: 5257  Weight:  0.76
     Name: AC148241_15.1  Len:   723  Check:  995  Weight:  0.76
     Name: AC154034_19.1  Len:   723  Check: 2845  Weight:  1.64
     Name: Consensus      Len:   723  Check: 3758  Weight:  0.00
    
    //
    
                          1                                                   50
           AC123570_11.1  .......... .......... .......... .MKPI.KFRL SFLFMLLASK
            AC147960_9.1  .......... .......... .......... .MKPI.KFRL SFLFMLLASK
           AC123570_22.1  .......... .......... .......... .MKPIIKFRL SLLFLLLVSQ
           AC123570_14.1  .......... .......... .......... .......MKI SFSFIVLILL
            AC147960_6.1  .......... .......... .......... .......MKI SFSFIVLILL
           AC123570_20.1  .......... .......... .......... .MEQPLKFRL SLLFLLLVLQ
            AC126779_2.1  .....MHLFP FIPFFIFNLF FFFFVSNISI ILGQQ...PY IGLATNACPR
           AC148994_16.1  MNTLDLKLHL KIEVQLIKLM KFLYLYILLC MLPYSINCQQ ILLNTTVTDC
           AC148994_17.1  .......... ...MELYNYI LH.FTVLFLC MFSQLFNCQQ VYLNNTVFDC
            AC126779_3.1  .......... .......... ...MSAFFLP SSSHALFLVL MLFFLTNISA
           AC148241_15.1  .......... .......... .......... .MVSSFFHTL IFFSATHILL
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  .......... .......... .......... .........l s.lf..l...
    
                          51                                                 100
           AC123570_11.1  SFIAESKCSK TCNIAL...A SYYLQDDTNL TYVSNIMQSN LV..TKPEDI
            AC147960_9.1  SFIAESKCSK TCNIAL...A SYYLQDDTNL TYVSNIMQSN LV..TKPEDI
           AC123570_22.1  SITSESKCNK TCDLAL...A SYYIRPGTTL ANISKVMQSN VV..SKAEDI
           AC123570_14.1  IASTESKCNE GCSLAL...A SYTLNHVSNL TYISNIMKSN VL..SKPQDI
            AC147960_6.1  IASTESKCNE GCSLAL...A SYTLNHVSNL TYISNIMKSN VL..SKPQDI
           AC123570_20.1  SITSESKCSK TCDLAL...A SYYIRPGTTL ANISKVMQSN VV..SKEEDI
            AC126779_2.1  KGDSKSIRGY TCN.GKTQTC QAYLTFRTQ. PIYSSVSTIS SLLGSNPSQL
           AC148994_16.1  SGTPSAPKGY LCN.SPQNSC NSFLTFRSK. PSYDNPTSIA YLLGSEASTI
           AC148994_17.1  TNPSTVPKGY LCN.GLKKSC TSFLVFKSK. PLYDNPTKIA YLLRSEASAI
            AC126779_3.1  QPLYISETNF TCPVDSPPSC ETYVAYRAQS PNFLSLSNIS DIFNLSPLRI
           AC148241_15.1  QLPQANGKNF SCTLNSSPSC DTYVAYFANS PNFLTLTAIS DIFDTSPQSI
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  ....eskc.. tc..al...a syyl.....l ...s..m.sn ....skp.di
    
                          101                                                150
           AC123570_11.1  VSYNTDTITN KDFVQSFTRV NVPFPCDCI. HDEFLGHIFQ YQVATKDTYL
            AC147960_9.1  VSYNTDTITN KDFVQSFTRV NVPFPCDCI. HDEFLGHIFQ YQVATKDTYL
           AC123570_22.1  SIYNIYTILS VDSVQVYTRL NVPFPCDCI. NDEFLGHTFL YKLRHGDSYA
           AC123570_14.1  IINNDKN... .......KRA NVPFPCNCI. NGEFLAYTFL YELQPGETYT
            AC147960_6.1  IINNDKN... .......KRA NVPFPCNCI. NGEFLAYTFL YELQPGETYT
           AC123570_20.1  LSYNT.AITN IDAIQSDTRV NVPFPCDCI. NDEFLGHTFL YKLRLGDIYP
            AC126779_2.1  AEINS.V.SL NETFETNKMV IVPVNCSCSG N..YYQANTS YVFQNTDTYF
           AC148994_16.1  ASINN.I.SR NEKLPTNKTI IVPILCSCSG N..IYQHNTP YTVQKGDTYF
           AC148994_17.1  ASINK.I.PL NEKIPSNKSI IVPVFCSCDG N..IYQHSTS YSVKQNDTYY
            AC126779_3.1  AKASN.IEAE DKKLIPDQLL LVPVTCGCTK N..HSFANIT YSIKQGDNFF
           AC148241_15.1  ARASN.IKDE NMNLIHGQLL LIPITCGCNG NGNYSFANIS HLIKESESYY
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  ...n...... ........r. nvpfpc.ci. n.efl...f. y.....dty.
    
                          151                                                200
           AC123570_11.1  SVASNNYSNL TTSEWLQNFN SY.PSNDIPD TGTLNVTVNC SCGN.SDVSK
            AC147960_9.1  SVASNNYSNL TTSEWLQNFN SY.PSNDIPD TGTLNVTVNC SCGN.SDVSK
           AC123570_22.1  SIATTTFGNL VTEEWIERVN VY.PRTYVPD SVMINVTVNC SCGN.GEVSK
           AC123570_14.1  SVAEESFSNL TTDVWMQNFN VY.RPTNIPD FAMIKVTVNC SCGN.KEVSM
            AC147960_6.1  SVAEESFSNL TTDVWMQNFN VY.RPTNIPD FAMIKVTVNC SCGN.KEVSM
           AC123570_20.1  SIAERTYTNL TTEEWMERVN SY.PGTDLPV SAMVNVTVNC SCGS.REVSK
            AC126779_2.1  IVANNTFEGL STCQALMHEN HN..PGDVYP GRKLLVPLRC ACPTKNQTQK
           AC148994_16.1  HLVNETYQSL TTCQALKGQN YY.ASENIAI GAEVTVPVLC ACPTTTQMAK
           AC148994_17.1  ELVKETYQGL TTCQALMGQN YY.APVSIQL DAELTVPILC ACPTANLTAK
            AC126779_3.1  ILSITSYQNL TNYLEFKNFN PNLSPTLLPL DTKVSVPLFC KCPSKNQLNK
           AC148241_15.1  YLSTISYQNL TNWQTVEDSN PNLNPYLLKI GTKINIPLFC RCPS.NYFAK
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  s.a.....nl tt..w....n .y......p. .....vtvnc scg....vsk
    
                          201                                                250
           AC123570_11.1  DYGLFITYPL RPEDSLELIS NKTEIDAELL QKYN...... ..........
            AC147960_9.1  DYGLFITYPL RPEDSLELIS NKTEIDAELL QKYN...... ..........
           AC123570_22.1  DYGLFITYPL RPDDTLESIA KYTKVKGELL QRYN...... ..........
           AC123570_14.1  DYGLFITYPL RSEDTLESIA KGAEIEAELL QRYN...... ..........
            AC147960_6.1  DYGLFITYPL RSEDTLESIA KGAEIEAELL QRYN...... ..........
           AC123570_20.1  DYGLFITYPL SSKDTLESIS KDTMIEAELL QRYN...... ..........
            AC126779_2.1  NIKYLLSYLV DWGDSVSFIS DKFGVNFRTT LEANTLSLTQ ST.....IYP
           AC148994_16.1  GITSLLVYIV NYGETVKSIG EAYGVDEQSI LEANELQ..P SENRSVILFA
           AC148994_17.1  GVTSLLVHMV NYGETVKSIG EAYGVDEHSM REANELSGLQ SANSSVILFA
            AC126779_3.1  GIKYLITYVW QDNDNVTLVS SKFGASQVEM LAENNHNF.. ..T....AST
           AC148241_15.1  GIEYLITYVW QPNDNLTLVA SKLGASPKDI ITANTNNFGQ NFT....VAI
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  dyglfitypl ...d.le.i. .......ell q.yn...... ..........
    
                          251                                                300
           AC123570_11.1  ......PGVN FSQGSGL... .......... .........V YIPGKDQ.NR
            AC147960_9.1  ......PGVN FSQGSGL... .......... .........V YIPGKDQ.NR
           AC123570_22.1  ......PGVN FSQGRGL... .......... .........V YIPGKGHLAR
           AC123570_14.1  ......PGVN FSKGSGL... .......... .........V FIPGKGT...
            AC147960_6.1  ......PGVN FSKGSGL... .......... .........V FIPGKGT...
           AC123570_20.1  ......PGVN FSQGS..... .......... .......... .........G
            AC126779_2.1  FTTLLVPLFD KPSSSQIQTH HSPSSSPPLS SSSS....TD KKSKKTWVYV
           AC148994_16.1  LTPILLPLRG KSCKEDPDSF YCTCSQGRLA DGS.....CN ESHGQKFPAK
           AC148994_17.1  STPILVPLRR KNCKENSDRF YCKCSEALHG DESSKGIYCD ESPRRKVPAK
            AC126779_3.1  NRSVLIPVTS LPKLDQP... .......... ........SS NGRKSSSQ.N
           AC148241_15.1  NLPVFIPVKN LPALSQSY.. .......... .......YSS SERKRINHFS
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  ......pgvn fs.gs..... .......... .......... ..pgk.....
    
                          301                                                350
           AC123570_11.1  NYVPFHTSTG G......... .......... .......... ..........
            AC147960_9.1  NYVPFHTSTG G......... .......... .......... ..........
           AC123570_22.1  SLVAAGICIR GVCMVLLLAI CIYVRYFRKK N....GEEES KLPPEDSMSP
           AC123570_14.1  ......TTKY QKLLSLIVAK RTESKWKLFA P....SPEHS RF...DLLLL
            AC147960_6.1  ......TTKY QKLLSLIVAK RTESKWKLFA P....SPEHS RF...DLLLL
           AC123570_20.1  LVFIPGKDEN GFYVPLPPRY FRMKNGEEKS K.....LSPD DSMTPSTKDV
            AC126779_2.1  VVGVLG.GVV IVALILFLYA FISFKKGKKK NDFLVSVSES TIFEEKEKPM
           AC148994_16.1  LVAALGVGIG AGFLVLFLLS YRLYQYIKKK R...ASIRKE KLFRQNGGYL
           AC148994_17.1  LVAASGMGIG TVLLCLFLLS CKLYQHIKKR R...ASTHKE KLFRQNGGYL
            AC126779_3.1  LALIIGISLG SAFFILVLTL SLVYVYCLKM K......... RL..NRSTSS
           AC148241_15.1  IIISIGICLG CTILISLLLL .LFYVYCLRK R......... KACENKCVPS
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  .......... .....l.... .......... .......... ..........
    
                          351                                                400
           AC123570_11.1  .......... .......... .......... .......... ..........
            AC147960_9.1  .......... .......... .......... .......... ..........
           AC123570_22.1  STKDGICTTF VLKFLA.... .......... .......... ..........
           AC123570_14.1  QKVGNLIIVF AEV....... .......... .......... ..........
            AC147960_6.1  QKVGNLIIVF AEV....... .......... .......... ..........
           AC123570_20.1  DKDTNGDTGS RYIWLDKSPE FSYEELANAT DNFSLAKKIG QGGFGEVYYG
            AC126779_2.1  KKEDEKLSEI ICGIAQSFKV YDFEEIKVAT DNFSPSCRVK ....GTVYRG
           AC148994_16.1  LQE..KLSSY ..GNGEMAKL FTAEELQRAT DDYNQSRFLG QGGYGTVYKG
           AC148994_17.1  LQE..KLSSY ..GNGEMAKL FTAEELQRAT DNYNRSRFLG QGGYGTVYKG
            AC126779_3.1  SETADKLLSG VSGYVSKPTM YEIDAIMEGT TNLSDNCKIG ....ESVYKA
           AC148241_15.1  VEITDKLISE VSNYVSKPTV YEVGMIMKAT MNLNEMCKIG ....KSVYKA
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  .......... .......... .......... .......... ..........
    
                          401                                                450
           AC123570_11.1  .......... .......... .......... .......... ..........
            AC147960_9.1  .......... .......... .......... .......... ..........
           AC123570_22.1  .......... .......... .......... .......... ..........
           AC123570_14.1  .......... .......... .......... .......... ..........
            AC147960_6.1  .......... .......... .......... .......... ..........
           AC123570_20.1  ELR.GQKIAI KKMKM...QA TREFLSELKV LTSVHHRNLV HLIGYCV..E
            AC126779_2.1  LIK.GDLAAI KKTEG..... ..DVSKEIQI LNKVNHSNVI RLSGVSF.NQ
           AC148994_16.1  MLPDGTIVAV KKSKHLDRNQ IETFVNEVVI LSQINHRNIV KLLGCCL.ET
           AC148994_17.1  MLPDGTIVAV KKSKELERNQ IETFVNEVVI LSQINHRNIV KLLGCCL.ET
            AC126779_3.1  NI.DGRVLAV KKIKK..... D..ASEELKI LQKVNHGNLV KLMGVSSDND
           AC148241_15.1  KI.DGLVLAV KNVKG..... HITVTEELMI LQKVNHANLV KLVGVSSGYD
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  .......... .......... .......... .......... ..........
    
                          451                                                500
           AC123570_11.1  .......... .......... .......... .......... ..........
            AC147960_9.1  .......... .......... .......... .......... ..........
           AC123570_22.1  .......... .......... .......... .......... ..........
           AC123570_14.1  .......... .......... .......... .......... ..........
            AC147960_6.1  .......... .......... .......... .......... ..........
           AC123570_20.1  GFLFLVYEYM ENGNLNQHLH NS......EK EPITLSTRMK IALDVARGLE
            AC126779_2.1  GHWYLVYEYA ANGALSDWLF SN..KKMDDG NILSWIRRIK IALDVAIGVE
           AC148994_16.1  ETPLLVYEYI HSGTLSQHIH GK.....DRD SSLSWESRLR IACEVAGAVT
           AC148994_17.1  ETPLLVYEFI PNGTLSQHIH MK.....DQE SSLSWENRLR IACEVAGAVA
            AC126779_3.1  GNCFLVYEYA ENGSLEEWLF SESSKTSNSV VSLTWSQRIT IAMDVAIGLQ
           AC148241_15.1  GNHFLVYEYA ENGSLYNWLL SE.......F CTLSWSQRLS IAVDIAIGLQ
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  .......... .......... .......... .......... ..........
    
                          501                                                550
           AC123570_11.1  .......... .......... .......... .......... ..........
            AC147960_9.1  .......... .......... .......... .......... ..........
           AC123570_22.1  .......... .......... .......... .......... ..........
           AC123570_14.1  .......... .......... .......... .......... ..........
            AC147960_6.1  .......... .......... .......... .......... ..........
           AC123570_20.1  YIHDHSIPVA DFGLTKLTDA ASSADNTDHV AGTFGYM... PPENAYGRIS
            AC126779_2.1  YLHSFTSPPH IHKDLKCSNI LLDSDFKAKV ANLRHVRCVE EVENDEEFVA
           AC148994_16.1  YMHFSASIPI FHRDIKPSNI LLDNNYSAKV SDFGTSR... SIPLDKTHLT
           AC148994_17.1  YMHFSASIPI FHRDIKPTNI LLDSNFSAKV SDFGTSR... SIPLDKTHLT
            AC126779_3.1  YMHEHTYPRI IHRDITTSNI LLGSNFKAKI ANFGMAR... ..........
           AC148241_15.1  YLHEHTQPCI VHRNIKSSNI LLDSKFKAKI ANFSVAR... ..........
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  .......... .......... .......... .......... ..........
    
                          551                                                600
           AC123570_11.1  .......... .......... .......... .......... ..........
            AC147960_9.1  .......... .......... .......... .......... ..........
           AC123570_22.1  .......... .......... .......... .......... ..........
           AC123570_14.1  .......... .......... .......... .......... ..........
            AC147960_6.1  .......... .......... .......... .......... ..........
           AC123570_20.1  RKIDVYAFGV VLYELISAKA AVIKIDKTEF ELKSLEIKTN ESI......D
            AC126779_2.1  TRHIVGTRGY MAPEYLENGL VSTKLDVYAF GILMLEIITG .KEVGFMISK
           AC148994_16.1  T.AVGGTFGY MDPEYFQSSQ FTDKSDVYSF GVVLVELITG RKPITFNDED
           AC148994_17.1  T.FVGGTYGY IDPEYFQSNQ FTNKSDVYSF GVVLVELITS RKPISFYDED
            AC126779_3.1  .......... .....TSTNS MMPKIDVFAF GVVLIELLTG KKAMTTKENG
           AC148241_15.1  .......... .....TTKNP MITKVDVLGY GMVLMELITG KKFLSYSEHS
           AC154034_19.1  .......... .......... .......... .......... ..........
               Consensus  .......... .......... .......... .......... ..........
    
                          601                                                650
           AC123570_11.1  .......... .......... .......... .......... ..........
            AC147960_9.1  .......... .......... .......... .......... ..........
           AC123570_22.1  .......... .......... .......... .......... ..........
           AC123570_14.1  .......... .......... .......... .......... ..........
            AC147960_6.1  .......... .......... .......... .......... ..........
           AC123570_20.1  EYKSLVALFD EVMDQTGDPI EGLRKLVDPR LGYNYSIDSI SKMAKLAKAC
            AC126779_2.1  DNENLLDVLS GILG.EKSGD EKLKEFMDPS LQGNYPFELA MFVIEIIQNC
           AC148994_16.1  EGQNMTAHFI SVMK.EN... .QLPQILDNA LVNEARKDDI LAIANLAMRC
           AC148994_17.1  DGQNLIAHFI SVMK.EN... .QVSQIIDAR LQKEAGKDTI LAISSLARRC
            AC126779_3.1  EVVILWKDFW KIFDLEGNRE ERLRKWMDPK LESFYPIDNA LSLASLAVNC
           AC148241_15.1  EVNMLWKDFK CVFDTEQKRE EIVRRWMDPK LGRFYNVVEA LSLFTLAVNC
           AC154034_19.1  .......... .......... ......MAMR ISR.YCVLFS AVIILLLNCC
               Consensus  .......... .......... .......... .......... .........c
    
                          651                                                700
           AC123570_11.1  .......... .......... .......... .......... ..........
            AC147960_9.1  .......... .......... .......... .......... ..........
           AC123570_22.1  .......... .......... .......... .......... ..........
           AC123570_14.1  .......... .......... .......... .......... ..........
            AC147960_6.1  .......... .......... .......... .......... ..........
           AC123570_20.1  INRDPKQRPK MRDLVVSLM. KLNYTIDDES RTGSAELSLA VEHDSN....
            AC126779_2.1  LNKDPGNRPA MDEIVPVLSR TLNSSLSWEM .......... ..........
           AC148994_16.1  LRLNGKKRPT MKEVSMELEA LRKVQSSLHI KDDQESPS.D EQSLRHTTND
           AC148994_17.1  LRLNHKKRPT MKEVSAELET LRKAQSSFEI NHDHDSSSSD EESFGHGINE
            AC126779_3.1  TADKSLSRPT IAEIVLCLS. LLNQPSSEPM LERSLTSGLD AEATHVVTSV
           AC148241_15.1  IEEQPLLRPT MGEVVLSLS. LLTQPSPT.L LEVSWTYGLD VEVAEMVTPI
           AC154034_19.1  ESRRSELTVE MKQRIANNNK ACDEIYVVRE GETLHTISEK CGDPFIVEEN
               Consensus  .......... .......... .......... .......... ..........
    
                          701                   723
           AC123570_11.1  .......... .......... ...
            AC147960_9.1  .......... .......... ...
           AC123570_22.1  .......... .......... ...
           AC123570_14.1  .......... .......... ...
            AC147960_6.1  .......... .......... ...
           AC123570_20.1  .......... .......... ...
            AC126779_2.1  .......... .......... ...
           AC148994_16.1  .TFHESTVES FSLSSQMEST YF.
           AC148994_17.1  STDQESKEES NLFSLQIESA SF.
            AC126779_3.1  IAR....... .......... ...
           AC148241_15.1  IAR....... .......... ...
           AC154034_19.1  PHIHDPDDVF PGLVIKINPF TNR
               Consensus  .......... .......... ...