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Input:FASTA | |
Name:alignment |
Multalin version 5.4.1 Copyright I.N.R.A. France 1989, 1991, 1994, 1996 Published research using this software should cite Multiple sequence alignment with hierarchical clustering F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890 Symbol comparison table: blosum62 Gap weight: 10 Gap length weight: 2 Consensus levels: high=90% low=50% Consensus symbols: ! is anyone of IV $ is anyone of LM % is anyone of FY # is anyone of NDQEBZ MSF: 723 Check: 0 .. Name: AC123570_11.1 Len: 723 Check: 5170 Weight: 1.18 Name: AC147960_9.1 Len: 723 Check: 5170 Weight: 1.18 Name: AC123570_22.1 Len: 723 Check: 502 Weight: 1.26 Name: AC123570_14.1 Len: 723 Check: 1077 Weight: 1.15 Name: AC147960_6.1 Len: 723 Check: 1077 Weight: 1.15 Name: AC123570_20.1 Len: 723 Check: 5377 Weight: 1.09 Name: AC126779_2.1 Len: 723 Check: 5060 Weight: 0.89 Name: AC148994_16.1 Len: 723 Check: 429 Weight: 0.47 Name: AC148994_17.1 Len: 723 Check: 6781 Weight: 0.47 Name: AC126779_3.1 Len: 723 Check: 5257 Weight: 0.76 Name: AC148241_15.1 Len: 723 Check: 995 Weight: 0.76 Name: AC154034_19.1 Len: 723 Check: 2845 Weight: 1.64 Name: Consensus Len: 723 Check: 3758 Weight: 0.00 // 1 50 AC123570_11.1 .......... .......... .......... .MKPI.KFRL SFLFMLLASK AC147960_9.1 .......... .......... .......... .MKPI.KFRL SFLFMLLASK AC123570_22.1 .......... .......... .......... .MKPIIKFRL SLLFLLLVSQ AC123570_14.1 .......... .......... .......... .......MKI SFSFIVLILL AC147960_6.1 .......... .......... .......... .......MKI SFSFIVLILL AC123570_20.1 .......... .......... .......... .MEQPLKFRL SLLFLLLVLQ AC126779_2.1 .....MHLFP FIPFFIFNLF FFFFVSNISI ILGQQ...PY IGLATNACPR AC148994_16.1 MNTLDLKLHL KIEVQLIKLM KFLYLYILLC MLPYSINCQQ ILLNTTVTDC AC148994_17.1 .......... ...MELYNYI LH.FTVLFLC MFSQLFNCQQ VYLNNTVFDC AC126779_3.1 .......... .......... ...MSAFFLP SSSHALFLVL MLFFLTNISA AC148241_15.1 .......... .......... .......... .MVSSFFHTL IFFSATHILL AC154034_19.1 .......... .......... .......... .......... .......... Consensus .......... .......... .......... .........l s.lf..l... 51 100 AC123570_11.1 SFIAESKCSK TCNIAL...A SYYLQDDTNL TYVSNIMQSN LV..TKPEDI AC147960_9.1 SFIAESKCSK TCNIAL...A SYYLQDDTNL TYVSNIMQSN LV..TKPEDI AC123570_22.1 SITSESKCNK TCDLAL...A SYYIRPGTTL ANISKVMQSN VV..SKAEDI AC123570_14.1 IASTESKCNE GCSLAL...A SYTLNHVSNL TYISNIMKSN VL..SKPQDI AC147960_6.1 IASTESKCNE GCSLAL...A SYTLNHVSNL TYISNIMKSN VL..SKPQDI AC123570_20.1 SITSESKCSK TCDLAL...A SYYIRPGTTL ANISKVMQSN VV..SKEEDI AC126779_2.1 KGDSKSIRGY TCN.GKTQTC QAYLTFRTQ. PIYSSVSTIS SLLGSNPSQL AC148994_16.1 SGTPSAPKGY LCN.SPQNSC NSFLTFRSK. PSYDNPTSIA YLLGSEASTI AC148994_17.1 TNPSTVPKGY LCN.GLKKSC TSFLVFKSK. PLYDNPTKIA YLLRSEASAI AC126779_3.1 QPLYISETNF TCPVDSPPSC ETYVAYRAQS PNFLSLSNIS DIFNLSPLRI AC148241_15.1 QLPQANGKNF SCTLNSSPSC DTYVAYFANS PNFLTLTAIS DIFDTSPQSI AC154034_19.1 .......... .......... .......... .......... .......... Consensus ....eskc.. tc..al...a syyl.....l ...s..m.sn ....skp.di 101 150 AC123570_11.1 VSYNTDTITN KDFVQSFTRV NVPFPCDCI. HDEFLGHIFQ YQVATKDTYL AC147960_9.1 VSYNTDTITN KDFVQSFTRV NVPFPCDCI. HDEFLGHIFQ YQVATKDTYL AC123570_22.1 SIYNIYTILS VDSVQVYTRL NVPFPCDCI. NDEFLGHTFL YKLRHGDSYA AC123570_14.1 IINNDKN... .......KRA NVPFPCNCI. NGEFLAYTFL YELQPGETYT AC147960_6.1 IINNDKN... .......KRA NVPFPCNCI. NGEFLAYTFL YELQPGETYT AC123570_20.1 LSYNT.AITN IDAIQSDTRV NVPFPCDCI. NDEFLGHTFL YKLRLGDIYP AC126779_2.1 AEINS.V.SL NETFETNKMV IVPVNCSCSG N..YYQANTS YVFQNTDTYF AC148994_16.1 ASINN.I.SR NEKLPTNKTI IVPILCSCSG N..IYQHNTP YTVQKGDTYF AC148994_17.1 ASINK.I.PL NEKIPSNKSI IVPVFCSCDG N..IYQHSTS YSVKQNDTYY AC126779_3.1 AKASN.IEAE DKKLIPDQLL LVPVTCGCTK N..HSFANIT YSIKQGDNFF AC148241_15.1 ARASN.IKDE NMNLIHGQLL LIPITCGCNG NGNYSFANIS HLIKESESYY AC154034_19.1 .......... .......... .......... .......... .......... Consensus ...n...... ........r. nvpfpc.ci. n.efl...f. y.....dty. 151 200 AC123570_11.1 SVASNNYSNL TTSEWLQNFN SY.PSNDIPD TGTLNVTVNC SCGN.SDVSK AC147960_9.1 SVASNNYSNL TTSEWLQNFN SY.PSNDIPD TGTLNVTVNC SCGN.SDVSK AC123570_22.1 SIATTTFGNL VTEEWIERVN VY.PRTYVPD SVMINVTVNC SCGN.GEVSK AC123570_14.1 SVAEESFSNL TTDVWMQNFN VY.RPTNIPD FAMIKVTVNC SCGN.KEVSM AC147960_6.1 SVAEESFSNL TTDVWMQNFN VY.RPTNIPD FAMIKVTVNC SCGN.KEVSM AC123570_20.1 SIAERTYTNL TTEEWMERVN SY.PGTDLPV SAMVNVTVNC SCGS.REVSK AC126779_2.1 IVANNTFEGL STCQALMHEN HN..PGDVYP GRKLLVPLRC ACPTKNQTQK AC148994_16.1 HLVNETYQSL TTCQALKGQN YY.ASENIAI GAEVTVPVLC ACPTTTQMAK AC148994_17.1 ELVKETYQGL TTCQALMGQN YY.APVSIQL DAELTVPILC ACPTANLTAK AC126779_3.1 ILSITSYQNL TNYLEFKNFN PNLSPTLLPL DTKVSVPLFC KCPSKNQLNK AC148241_15.1 YLSTISYQNL TNWQTVEDSN PNLNPYLLKI GTKINIPLFC RCPS.NYFAK AC154034_19.1 .......... .......... .......... .......... .......... Consensus s.a.....nl tt..w....n .y......p. .....vtvnc scg....vsk 201 250 AC123570_11.1 DYGLFITYPL RPEDSLELIS NKTEIDAELL QKYN...... .......... AC147960_9.1 DYGLFITYPL RPEDSLELIS NKTEIDAELL QKYN...... .......... AC123570_22.1 DYGLFITYPL RPDDTLESIA KYTKVKGELL QRYN...... .......... AC123570_14.1 DYGLFITYPL RSEDTLESIA KGAEIEAELL QRYN...... .......... AC147960_6.1 DYGLFITYPL RSEDTLESIA KGAEIEAELL QRYN...... .......... AC123570_20.1 DYGLFITYPL SSKDTLESIS KDTMIEAELL QRYN...... .......... AC126779_2.1 NIKYLLSYLV DWGDSVSFIS DKFGVNFRTT LEANTLSLTQ ST.....IYP AC148994_16.1 GITSLLVYIV NYGETVKSIG EAYGVDEQSI LEANELQ..P SENRSVILFA AC148994_17.1 GVTSLLVHMV NYGETVKSIG EAYGVDEHSM REANELSGLQ SANSSVILFA AC126779_3.1 GIKYLITYVW QDNDNVTLVS SKFGASQVEM LAENNHNF.. ..T....AST AC148241_15.1 GIEYLITYVW QPNDNLTLVA SKLGASPKDI ITANTNNFGQ NFT....VAI AC154034_19.1 .......... .......... .......... .......... .......... Consensus dyglfitypl ...d.le.i. .......ell q.yn...... .......... 251 300 AC123570_11.1 ......PGVN FSQGSGL... .......... .........V YIPGKDQ.NR AC147960_9.1 ......PGVN FSQGSGL... .......... .........V YIPGKDQ.NR AC123570_22.1 ......PGVN FSQGRGL... .......... .........V YIPGKGHLAR AC123570_14.1 ......PGVN FSKGSGL... .......... .........V FIPGKGT... AC147960_6.1 ......PGVN FSKGSGL... .......... .........V FIPGKGT... AC123570_20.1 ......PGVN FSQGS..... .......... .......... .........G AC126779_2.1 FTTLLVPLFD KPSSSQIQTH HSPSSSPPLS SSSS....TD KKSKKTWVYV AC148994_16.1 LTPILLPLRG KSCKEDPDSF YCTCSQGRLA DGS.....CN ESHGQKFPAK AC148994_17.1 STPILVPLRR KNCKENSDRF YCKCSEALHG DESSKGIYCD ESPRRKVPAK AC126779_3.1 NRSVLIPVTS LPKLDQP... .......... ........SS NGRKSSSQ.N AC148241_15.1 NLPVFIPVKN LPALSQSY.. .......... .......YSS SERKRINHFS AC154034_19.1 .......... .......... .......... .......... .......... Consensus ......pgvn fs.gs..... .......... .......... ..pgk..... 301 350 AC123570_11.1 NYVPFHTSTG G......... .......... .......... .......... AC147960_9.1 NYVPFHTSTG G......... .......... .......... .......... AC123570_22.1 SLVAAGICIR GVCMVLLLAI CIYVRYFRKK N....GEEES KLPPEDSMSP AC123570_14.1 ......TTKY QKLLSLIVAK RTESKWKLFA P....SPEHS RF...DLLLL AC147960_6.1 ......TTKY QKLLSLIVAK RTESKWKLFA P....SPEHS RF...DLLLL AC123570_20.1 LVFIPGKDEN GFYVPLPPRY FRMKNGEEKS K.....LSPD DSMTPSTKDV AC126779_2.1 VVGVLG.GVV IVALILFLYA FISFKKGKKK NDFLVSVSES TIFEEKEKPM AC148994_16.1 LVAALGVGIG AGFLVLFLLS YRLYQYIKKK R...ASIRKE KLFRQNGGYL AC148994_17.1 LVAASGMGIG TVLLCLFLLS CKLYQHIKKR R...ASTHKE KLFRQNGGYL AC126779_3.1 LALIIGISLG SAFFILVLTL SLVYVYCLKM K......... RL..NRSTSS AC148241_15.1 IIISIGICLG CTILISLLLL .LFYVYCLRK R......... KACENKCVPS AC154034_19.1 .......... .......... .......... .......... .......... Consensus .......... .....l.... .......... .......... .......... 351 400 AC123570_11.1 .......... .......... .......... .......... .......... AC147960_9.1 .......... .......... .......... .......... .......... AC123570_22.1 STKDGICTTF VLKFLA.... .......... .......... .......... AC123570_14.1 QKVGNLIIVF AEV....... .......... .......... .......... AC147960_6.1 QKVGNLIIVF AEV....... .......... .......... .......... AC123570_20.1 DKDTNGDTGS RYIWLDKSPE FSYEELANAT DNFSLAKKIG QGGFGEVYYG AC126779_2.1 KKEDEKLSEI ICGIAQSFKV YDFEEIKVAT DNFSPSCRVK ....GTVYRG AC148994_16.1 LQE..KLSSY ..GNGEMAKL FTAEELQRAT DDYNQSRFLG QGGYGTVYKG AC148994_17.1 LQE..KLSSY ..GNGEMAKL FTAEELQRAT DNYNRSRFLG QGGYGTVYKG AC126779_3.1 SETADKLLSG VSGYVSKPTM YEIDAIMEGT TNLSDNCKIG ....ESVYKA AC148241_15.1 VEITDKLISE VSNYVSKPTV YEVGMIMKAT MNLNEMCKIG ....KSVYKA AC154034_19.1 .......... .......... .......... .......... .......... Consensus .......... .......... .......... .......... .......... 401 450 AC123570_11.1 .......... .......... .......... .......... .......... AC147960_9.1 .......... .......... .......... .......... .......... AC123570_22.1 .......... .......... .......... .......... .......... AC123570_14.1 .......... .......... .......... .......... .......... AC147960_6.1 .......... .......... .......... .......... .......... AC123570_20.1 ELR.GQKIAI KKMKM...QA TREFLSELKV LTSVHHRNLV HLIGYCV..E AC126779_2.1 LIK.GDLAAI KKTEG..... ..DVSKEIQI LNKVNHSNVI RLSGVSF.NQ AC148994_16.1 MLPDGTIVAV KKSKHLDRNQ IETFVNEVVI LSQINHRNIV KLLGCCL.ET AC148994_17.1 MLPDGTIVAV KKSKELERNQ IETFVNEVVI LSQINHRNIV KLLGCCL.ET AC126779_3.1 NI.DGRVLAV KKIKK..... D..ASEELKI LQKVNHGNLV KLMGVSSDND AC148241_15.1 KI.DGLVLAV KNVKG..... HITVTEELMI LQKVNHANLV KLVGVSSGYD AC154034_19.1 .......... .......... .......... .......... .......... Consensus .......... .......... .......... .......... .......... 451 500 AC123570_11.1 .......... .......... .......... .......... .......... AC147960_9.1 .......... .......... .......... .......... .......... AC123570_22.1 .......... .......... .......... .......... .......... AC123570_14.1 .......... .......... .......... .......... .......... AC147960_6.1 .......... .......... .......... .......... .......... AC123570_20.1 GFLFLVYEYM ENGNLNQHLH NS......EK EPITLSTRMK IALDVARGLE AC126779_2.1 GHWYLVYEYA ANGALSDWLF SN..KKMDDG NILSWIRRIK IALDVAIGVE AC148994_16.1 ETPLLVYEYI HSGTLSQHIH GK.....DRD SSLSWESRLR IACEVAGAVT AC148994_17.1 ETPLLVYEFI PNGTLSQHIH MK.....DQE SSLSWENRLR IACEVAGAVA AC126779_3.1 GNCFLVYEYA ENGSLEEWLF SESSKTSNSV VSLTWSQRIT IAMDVAIGLQ AC148241_15.1 GNHFLVYEYA ENGSLYNWLL SE.......F CTLSWSQRLS IAVDIAIGLQ AC154034_19.1 .......... .......... .......... .......... .......... Consensus .......... .......... .......... .......... .......... 501 550 AC123570_11.1 .......... .......... .......... .......... .......... AC147960_9.1 .......... .......... .......... .......... .......... AC123570_22.1 .......... .......... .......... .......... .......... AC123570_14.1 .......... .......... .......... .......... .......... AC147960_6.1 .......... .......... .......... .......... .......... AC123570_20.1 YIHDHSIPVA DFGLTKLTDA ASSADNTDHV AGTFGYM... PPENAYGRIS AC126779_2.1 YLHSFTSPPH IHKDLKCSNI LLDSDFKAKV ANLRHVRCVE EVENDEEFVA AC148994_16.1 YMHFSASIPI FHRDIKPSNI LLDNNYSAKV SDFGTSR... SIPLDKTHLT AC148994_17.1 YMHFSASIPI FHRDIKPTNI LLDSNFSAKV SDFGTSR... SIPLDKTHLT AC126779_3.1 YMHEHTYPRI IHRDITTSNI LLGSNFKAKI ANFGMAR... .......... AC148241_15.1 YLHEHTQPCI VHRNIKSSNI LLDSKFKAKI ANFSVAR... .......... AC154034_19.1 .......... .......... .......... .......... .......... Consensus .......... .......... .......... .......... .......... 551 600 AC123570_11.1 .......... .......... .......... .......... .......... AC147960_9.1 .......... .......... .......... .......... .......... AC123570_22.1 .......... .......... .......... .......... .......... AC123570_14.1 .......... .......... .......... .......... .......... AC147960_6.1 .......... .......... .......... .......... .......... AC123570_20.1 RKIDVYAFGV VLYELISAKA AVIKIDKTEF ELKSLEIKTN ESI......D AC126779_2.1 TRHIVGTRGY MAPEYLENGL VSTKLDVYAF GILMLEIITG .KEVGFMISK AC148994_16.1 T.AVGGTFGY MDPEYFQSSQ FTDKSDVYSF GVVLVELITG RKPITFNDED AC148994_17.1 T.FVGGTYGY IDPEYFQSNQ FTNKSDVYSF GVVLVELITS RKPISFYDED AC126779_3.1 .......... .....TSTNS MMPKIDVFAF GVVLIELLTG KKAMTTKENG AC148241_15.1 .......... .....TTKNP MITKVDVLGY GMVLMELITG KKFLSYSEHS AC154034_19.1 .......... .......... .......... .......... .......... Consensus .......... .......... .......... .......... .......... 601 650 AC123570_11.1 .......... .......... .......... .......... .......... AC147960_9.1 .......... .......... .......... .......... .......... AC123570_22.1 .......... .......... .......... .......... .......... AC123570_14.1 .......... .......... .......... .......... .......... AC147960_6.1 .......... .......... .......... .......... .......... AC123570_20.1 EYKSLVALFD EVMDQTGDPI EGLRKLVDPR LGYNYSIDSI SKMAKLAKAC AC126779_2.1 DNENLLDVLS GILG.EKSGD EKLKEFMDPS LQGNYPFELA MFVIEIIQNC AC148994_16.1 EGQNMTAHFI SVMK.EN... .QLPQILDNA LVNEARKDDI LAIANLAMRC AC148994_17.1 DGQNLIAHFI SVMK.EN... .QVSQIIDAR LQKEAGKDTI LAISSLARRC AC126779_3.1 EVVILWKDFW KIFDLEGNRE ERLRKWMDPK LESFYPIDNA LSLASLAVNC AC148241_15.1 EVNMLWKDFK CVFDTEQKRE EIVRRWMDPK LGRFYNVVEA LSLFTLAVNC AC154034_19.1 .......... .......... ......MAMR ISR.YCVLFS AVIILLLNCC Consensus .......... .......... .......... .......... .........c 651 700 AC123570_11.1 .......... .......... .......... .......... .......... AC147960_9.1 .......... .......... .......... .......... .......... AC123570_22.1 .......... .......... .......... .......... .......... AC123570_14.1 .......... .......... .......... .......... .......... AC147960_6.1 .......... .......... .......... .......... .......... AC123570_20.1 INRDPKQRPK MRDLVVSLM. KLNYTIDDES RTGSAELSLA VEHDSN.... AC126779_2.1 LNKDPGNRPA MDEIVPVLSR TLNSSLSWEM .......... .......... AC148994_16.1 LRLNGKKRPT MKEVSMELEA LRKVQSSLHI KDDQESPS.D EQSLRHTTND AC148994_17.1 LRLNHKKRPT MKEVSAELET LRKAQSSFEI NHDHDSSSSD EESFGHGINE AC126779_3.1 TADKSLSRPT IAEIVLCLS. LLNQPSSEPM LERSLTSGLD AEATHVVTSV AC148241_15.1 IEEQPLLRPT MGEVVLSLS. LLTQPSPT.L LEVSWTYGLD VEVAEMVTPI AC154034_19.1 ESRRSELTVE MKQRIANNNK ACDEIYVVRE GETLHTISEK CGDPFIVEEN Consensus .......... .......... .......... .......... .......... 701 723 AC123570_11.1 .......... .......... ... AC147960_9.1 .......... .......... ... AC123570_22.1 .......... .......... ... AC123570_14.1 .......... .......... ... AC147960_6.1 .......... .......... ... AC123570_20.1 .......... .......... ... AC126779_2.1 .......... .......... ... AC148994_16.1 .TFHESTVES FSLSSQMEST YF. AC148994_17.1 STDQESKEES NLFSLQIESA SF. AC126779_3.1 IAR....... .......... ... AC148241_15.1 IAR....... .......... ... AC154034_19.1 PHIHDPDDVF PGLVIKINPF TNR Consensus .......... .......... ... |